Stem-loop bta-mir-202

Accession

MI0009771

Description

Bos taurus bta-mir-202 precursor miRNA

Literature search

35 open access papers mention bta-mir-202
(133 sentences)

Sequence

16400 reads, 64.0 reads per million, 112 experiments

gccacucgcuguuccuuuUUCCUAUGCAUAUACUUCUUUGagggucuggccuaaAGAGGUGUAGGGCAUGGGAAAAuggggccccgagguuccccugcg
....((((..(((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).)))))..))))...........

Structure

-------gcca    cu     u           -A           G   gu 
           cucg  guucc uuUUCCUAUGC  UAUACUUCUUU agg  c
           ||||  ||||| |||||||||||  ||||||||||| |||   
           gagc  cgggg AAAAGGGUACG  AUGUGGAGAaa ucc  u
gcguccccuug    cc     u           GG           -   gg 

Annotation confidence High

Genome context

26: 25761610-25761708 [+]

Mature bta-miR-202-5p

• Accession: MIMAT0009259
• Description: Bos taurus bta-miR-202-5p mature miRNA
• Sequence: 19 - UUCCUAUGCAUAUACUUCUUUG - 40
• Evidence: not_experimental

Mature bta-miR-202-3p

• Accession: MIMAT0050830
• Description: Bos taurus bta-miR-202-3p mature miRNA
• Sequence: 55 - AGAGGUGUAGGGCAUGGGAAAA - 76
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125