Stem-loop bta-mir-208b

Accession

MI0009774

Description

Bos taurus bta-mir-208b precursor miRNA

Literature search

30 open access papers mention bta-mir-208b
(97 sentences)

Sequence

198967 reads, 791.0 reads per million, 90 experiments

ccucucagggAAGCUUUUUGCUCGCGUUAUGUUucucauccgaauAUAAGACGAACAAAAGGUUUGUcugagggcag
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))...

Structure

--c        g          C   CG        cu 
   cucucagg AAGCUUUUUG UCG  UUAUGUUu  c
   |||||||| |||||||||| |||  ||||||||  a
   gggagucU UUUGGAAAAC AGC  AAUAuaag  u
gac        G          A   AG        cc 

Annotation confidence High

Genome context

10: 21505515-21505591 [+]

Mature bta-miR-208b-5p

• Accession: MIMAT0050832
• Description: Bos taurus bta-miR-208b-5p mature miRNA
• Sequence: 11 - AAGCUUUUUGCUCGCGUUAUGUU - 33
• Evidence: not_experimental

Mature bta-miR-208b-3p

• Accession: MIMAT0009262
• Description: Bos taurus bta-miR-208b-3p mature miRNA
• Sequence: 46 - AUAAGACGAACAAAAGGUUUGU - 67
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125