Stem-loop bta-mir-1271

Accession

MI0010480

Description

Bos taurus bta-mir-1271 precursor miRNA mir-1271

Gene
family

RF04085; mir-1271

Literature search

20 open access papers mention bta-mir-1271
(72 sentences)

Sequence

341384 reads, 102.0 reads per million, 320 experiments

cacccagaucagugCUUGGCACCUAGUAAGUACUCAguauauacuuguugAGUGCCUGCUAUGUGCCAGGCAuugugcugagggcu
..(((((..(((((((((((((.(((((.((((((((((......)))))))))).))))).)))))))))))))..))).))...

Structure

-ca  -   au             C     A          ua 
   cc cag  cagugCUUGGCAC UAGUA GUACUCAgua  u
   || |||  ||||||||||||| ||||| ||||||||||   
   gg guc  guuACGGACCGUG AUCGU CGUGAguugu  a
ucg  a   gu             U     C          uc 

Annotation confidence High

Genome context

7: 37843326-37843411 [+]

Mature bta-miR-1271-5p

• Accession: MIMAT0009975
• Description: Bos taurus bta-miR-1271-5p mature miRNA
• Sequence: 15 - CUUGGCACCUAGUAAGUACUCA - 36
• Evidence: not_experimental

Mature bta-miR-1271-3p

• Accession: MIMAT0061038
• Description: Bos taurus bta-miR-1271-3p mature miRNA
• Sequence: 51 - AGUGCCUGCUAUGUGCCAGGCA - 72
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125