Stem-loop bta-mir-758

Accession

MI0009892

Description

Bos taurus bta-mir-758 precursor miRNA

Literature search

9 open access papers mention bta-mir-758
(14 sentences)

Sequence

13309 reads, 8.0 reads per million, 265 experiments

gccuggguacaugagAUGGUUGACCAGAGAGCACACGcuuuauuugugccgUUUGUGACCUGGUCCACUAACCcucaguaucuaaucc
...(((((((.((((.((((.((((((.(.(((.((((.........).))).)))..))))))).))))...)))))))))))....

Structure

-gcc       a    --A    U      A -A   C   - uuu 
    uggguac ugag   UGGU GACCAG G  GCA ACG c   a
    ||||||| ||||   |||| |||||| |  ||| ||| |   u
    aucuaug acuc   AUCA CUGGUC C  UGU Ugc g   u
ccua       -    CCA    C      - AG   U   c ugu 

Annotation confidence High

Genome context

21: 65916403-65916490 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from bta-mir-758

Mature bta-miR-758-5p

• Accession: MIMAT0050886
• Description: Bos taurus bta-miR-758-5p mature miRNA
• Sequence: 16 - AUGGUUGACCAGAGAGCACACG - 37
• Evidence: not_experimental

Mature bta-miR-758-3p

• Accession: MIMAT0009370
• Description: Bos taurus bta-miR-758-3p mature miRNA
• Sequence: 52 - UUUGUGACCUGGUCCACUAACC - 73
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125