Stem-loop bta-mir-216b

Accession

MI0009778

Description

Bos taurus bta-mir-216b precursor miRNA

Literature search

15 open access papers mention bta-mir-216b
(248 sentences)

Sequence

1366 reads, 2.0 reads per million, 147 experiments

gcagacuggaAAAUCUCUGCAGGCAAAUGUGAugucacuaaagaaaucaCACACUUACCCGUAGAGAUUCUacagucugaca
.(((((((...(((((((((.((.((.((((((.((......)).))))))...)).)).)))))))))...)))))))...

Structure

--g       gaA         A  C  --A      g  ac 
   cagacug   AAUCUCUGC GG AA   UGUGAu uc  u
   |||||||   ||||||||| || ||   |||||| ||   
   gucugac   UUAGAGAUG CC UU   ACacua ag  a
aca       aUC         C  A  CAC      a  aa 

Annotation confidence High

Genome context

11: 38657082-38657163 [-]

Mature bta-miR-216b-5p

• Accession: MIMAT0009266
• Description: Bos taurus bta-miR-216b-5p mature miRNA
• Sequence: 11 - AAAUCUCUGCAGGCAAAUGUGA - 32
• Evidence: not_experimental

Mature bta-miR-216b-3p

• Accession: MIMAT0050835
• Description: Bos taurus bta-miR-216b-3p mature miRNA
• Sequence: 50 - CACACUUACCCGUAGAGAUUCU - 71
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125