Stem-loop bta-mir-1839

Accession

MI0010473

Description

Bos taurus bta-mir-1839 precursor miRNA

Literature search

3 open access papers mention bta-mir-1839
(6 sentences)

Sequence

10367 reads, 210 reads per million, 74 experiments

aaugaaAAGGUAGAUAGAACAGGUCUUGUUugcaaaaugaauucaugaccuacauaucuaccaacagcaaug
........((((((((....(((((.((....((...))....)).)))))...))))))))..........

Structure

--aaugaaAA        GAAC     U  UUug  a 
          GGUAGAUA    AGGUC UG    ca  
          ||||||||    ||||| ||    || a
          ccaucuau    uccag ac    gu  
guaacgacaa        -aca     u  uuaa  a 

Annotation confidence Not enough data

Genome context

chr14: 1928039-1928110 [-]

Mature bta-miR-1839

• Accession: MIMAT0009968
• Description: Bos taurus bta-miR-1839 mature miRNA
• Sequence: 7 - AAGGUAGAUAGAACAGGUCUUGUU - 30
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026