Stem-loop bta-mir-874

Accession

MI0009900

Description

Bos taurus bta-mir-874 precursor miRNA

Literature search

6 open access papers mention bta-mir-874
(18 sentences)

Sequence

1751 reads, 48 reads per million, 69 experiments

uuagcccugcggccccacgcaccaggguaagagagacucacuucCUGCCCUGGCCCGAGGGACCGAcuggcugggc
((((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))))..

Structure

--      cug   c   a  ca        a   aga 
  uuagcc   cgg ccc cg  ccagggua gag   c
  ||||||   ||| ||| ||  |||||||| |||    
  ggucgg   GCC GGG GC  GGUCCCGU cuu   u
cg      ucA   A   A  CC        C   cac 

Annotation confidence High

Genome context

chr7: 50886238-50886313 [-]

Mature bta-miR-874

• Accession: MIMAT0009378
• Description: Bos taurus bta-miR-874 mature miRNA
• Sequence: 45 - CUGCCCUGGCCCGAGGGACCGA - 66
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125