Stem-loop bta-mir-874

Accession

MI0009900

Description

Bos taurus bta-mir-874 precursor miRNA

Literature search

25 open access papers mention bta-mir-874
(213 sentences)

Sequence

190597 reads, 119.0 reads per million, 319 experiments

uuagcccugCGGCCCCACGCACCAGGGUAAGAgagacucacuucCUGCCCUGGCCCGAGGGACCGACUggcugggc
((((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))))..

Structure

--      cug   C   A  CA        A   aga 
  uuagcc   CGG CCC CG  CCAGGGUA GAg   c
  ||||||   ||| ||| ||  |||||||| |||    
  ggucgg   GCC GGG GC  GGUCCCGU cuu   u
cg      UCA   A   A  CC        C   cac 

Annotation confidence High

Genome context

7: 49091396-49091471 [-]

Mature bta-miR-874-5p

• Accession: MIMAT0061032
• Description: Bos taurus bta-miR-874-5p mature miRNA
• Sequence: 10 - CGGCCCCACGCACCAGGGUAAGA - 32
• Evidence: experimental ; cloned [3]

Mature bta-miR-874-3p

• Accession: MIMAT0009378
• Description: Bos taurus bta-miR-874-3p mature miRNA
• Sequence: 45 - CUGCCCUGGCCCGAGGGACCGACU - 68
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125