Stem-loop bta-mir-92b

Accession

MI0009906

Description

Bos taurus bta-mir-92b precursor miRNA

Literature search

53 open access papers mention bta-mir-92b
(178 sentences)

Sequence

589808 reads, 780.0 reads per million, 320 experiments

cgggccccgggcgggcgggAGGGACGGGACGCGGUGCAGUGUUguucuuuccccugccaaUAUUGCACUCGUCCCGGCCUCCggcccccucggccc
.(((((..(((.((((.(((((..(((((((.((((((((((((..(........).))))))))))))))))))).))))).))))))).)))))

Structure

c     cc   c    g     GA       C            uu uuu 
 gggcc  ggg gggc ggAGG  CGGGACG GGUGCAGUGUUg  c   c
 |||||  ||| |||| |||||  ||||||| ||||||||||||  |    
 cccgg  ucc cccg CCUCC  GCCCUGC UCACGUUAUaac  g   c
-     -c   -    g     -G       -            -c ucc 

Annotation confidence High

Genome context

3: 15425799-15425894 [-]

Mature bta-miR-92b-5p

• Accession: MIMAT0050893
• Description: Bos taurus bta-miR-92b-5p mature miRNA
• Sequence: 20 - AGGGACGGGACGCGGUGCAGUGUU - 43
• Evidence: experimental ; cloned [2]

Mature bta-miR-92b-3p

• Accession: MIMAT0009384
• Description: Bos taurus bta-miR-92b-3p mature miRNA
• Sequence: 61 - UAUUGCACUCGUCCCGGCCUCC - 82
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125