Stem-loop bta-mir-488

Accession

MI0009844

Description

Bos taurus bta-mir-488 precursor miRNA

Literature search

1 open access papers mention bta-mir-488
(1 sentences)

Sequence

8 reads, 2 reads per million, 6 experiments

gagaaucaucucucccagauaauggcacucucaaacagguuuccagguuguUUGAAAGGCUGUUUCUUGGUCagaagacucucaauuccuucugga
((((.((.(((..((.(((.((((((.((.((((((((.((...)).)))))))).))))))))))).))..))).)).))))...(((....)))

Structure

-------------    a  a   cu  c   u      a  c        g  u 
             gaga uc ucu  cc aga aauggc cu ucaaacag uu  
             |||| || |||  || ||| |||||| || |||||||| || c
             cucu ag aga  GG UCU UUGUCG GA AGUUuguu ga  
aggucuuccuuaa    c  a   CU  U   -      -  A        g  c 

Annotation confidence Not enough data

Genome context

chr16: 59871602-59871697 [-]

Mature bta-miR-488

• Accession: MIMAT0009330
• Description: Bos taurus bta-miR-488 mature miRNA
• Sequence: 52 - UUGAAAGGCUGUUUCUUGGUC - 72
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125