Stem-loop bta-mir-147

Accession

MI0009747

Description

Bos taurus bta-mir-147 precursor miRNA

Literature search

20 open access papers mention bta-mir-147
(55 sentences)

Sequence

85338 reads, 54.0 reads per million, 315 experiments

uaugaaucuaGUGGAAACACUUCUGCACAGGCUagauuauggauaccaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagg
...((((.((((((((.((.((((((((((((((.....)))...))..))))))))).)).)))))))).)))).....

Structure

--uau    c        A  C         --  ---   g 
     gaau uaGUGGAA CA UUCUGCACA  GG   CUa a
     |||| |||||||| || |||||||||  ||   ||| u
     uuua AUCGUCUU GU AAGGCGUGU  cc   ggu u
ggauu    c        C  A         Ga  aua   a 

Annotation confidence High

Genome context

10: 65015857-65015936 [-]

Mature bta-miR-147-5p

• Accession: MIMAT0060988
• Description: Bos taurus bta-miR-147-5p mature miRNA
• Sequence: 11 - GUGGAAACACUUCUGCACAGGCU - 33
• Evidence: not_experimental

Mature bta-miR-147-3p

• Accession: MIMAT0009237
• Description: Bos taurus bta-miR-147-3p mature miRNA
• Sequence: 49 - GUGUGCGGAAAUGCUUCUGCUA - 70
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125