Stem-loop bta-mir-1307

Accession

MI0010474

Description

Bos taurus bta-mir-1307 precursor miRNA mir-1307

Gene
family

RF01038; mir-1307

Literature search

12 open access papers mention bta-mir-1307
(18 sentences)

Sequence

485478 reads, 432.0 reads per million, 321 experiments

caucaagagucggcugagucacugccacugccuaccaaucUCGACCGGACCUCGACCGGCUCgucuauauugccaaucgACUCGGCGUGGCGUCGGUCGUGGuagauaggcggucauacagacgaguuuucaaguguugcucuggugac
(((((.((((..(((((.((.(((..((((((((.(.(((.(((((((.((.((.((((.(((..............))).)))))).))..))))))).))).).))))))))....)))..)).))....)))...)))))))))..

Structure

--     a    -cg   ----  g  -a   --cc        c a   U       -A  U  A    C   ucuaua 
  cauca gagu   gcu    ga uc  cug    acugccua c auc CGACCGG  CC CG CCGG UCg      u
  ||||| ||||   |||    || ||  |||    |||||||| | ||| |||||||  || || |||| |||       
  guggu cucg   uga    uu ag  gac    uggcggau g uGG GCUGGCU  GG GC GGCU Agc      u
ca     -    uug   acuu  g  ca   auac        a a   U       GC  U  -    C   uaaccg 

Annotation confidence High

Genome context

26: 23985830-23985978 [-]

Mature bta-miR-1307-5p

• Accession: MIMAT0061036
• Description: Bos taurus bta-miR-1307-5p mature miRNA
• Sequence: 41 - UCGACCGGACCUCGACCGGCUC - 62
• Evidence: not_experimental

Mature bta-miR-1307-3p

• Accession: MIMAT0009969
• Description: Bos taurus bta-miR-1307-3p mature miRNA
• Sequence: 80 - ACUCGGCGUGGCGUCGGUCGUGG - 102
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125