Stem-loop bta-mir-185

Accession

MI0009758

Description

Bos taurus bta-mir-185 precursor miRNA mir-185

Gene
family

RF00771; mir-185

Literature search

81 open access papers mention bta-mir-185
(565 sentences)

Sequence

2940779 reads, 554.0 reads per million, 320 experiments

gggggugagggacUGGAGAGAAAGGCAGUUCCUGAugguccccuccccAGGGGCUGGCUUUCCUCCGGCcccuccuucc
(((((.(((((.((((((.(((((.(((((((((..((......)).))))))))).))))))))))).))))))))))

Structure

     u     a      A     G         Au  uc 
ggggg gaggg cUGGAG GAAAG CAGUUCCUG  gg  c
||||| ||||| |||||| ||||| |||||||||  ||   
ccuuc cuccc GGCCUC CUUUC GUCGGGGAc  cc  c
     -     C      -     G         -c  uc 

Annotation confidence High

Genome context

17: 72954593-72954671 [+]

Mature bta-miR-185-5p

• Accession: MIMAT0009247
• Description: Bos taurus bta-miR-185-5p mature miRNA
• Sequence: 14 - UGGAGAGAAAGGCAGUUCCUGA - 35
• Evidence: not_experimental

Mature bta-miR-185-3p

• Accession: MIMAT0060993
• Description: Bos taurus bta-miR-185-3p mature miRNA
• Sequence: 49 - AGGGGCUGGCUUUCCUCCGGC - 69
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125