Stem-loop bta-mir-30f

Accession

MI0009795

Description

Bos taurus bta-mir-30f precursor miRNA

Literature search

19 open access papers mention bta-mir-30f
(104 sentences)

Sequence

1368515 reads, 815.0 reads per million, 321 experiments

gagggccagauacUGUAAACACCCUACACUCUCAGCUgugcacagugagaaagCUGGGAGAAGGCUGUUUACUCUcucugccuu
.(((((.(((....(((((((.(((...(((((((((..............))))))))).))).)))))))....))))))))

Structure

g     c   uacU       C   ACA         gugcac 
 agggc aga    GUAAACA CCU   CUCUCAGCU      a
 ||||| |||    ||||||| |||   |||||||||       
 uuccg ucu    CAUUUGU GGA   GAGGGUCga      g
-     -   cUCU       C   --A         aagagu 

Annotation confidence High

Genome context

9: 10494819-10494902 [-]

Mature bta-miR-30f-5p

• Accession: MIMAT0009282
• Description: Bos taurus bta-miR-30f-5p mature miRNA
• Sequence: 14 - UGUAAACACCCUACACUCUCAGCU - 37
• Evidence: experimental ; cloned [2]

Mature bta-miR-30f-3p

• Accession: MIMAT0050847
• Description: Bos taurus bta-miR-30f-3p mature miRNA
• Sequence: 54 - CUGGGAGAAGGCUGUUUACUCU - 75
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125