Stem-loop bta-mir-33b

Accession

MI0009808

Description

Bos taurus bta-mir-33b precursor miRNA

Literature search

15 open access papers mention bta-mir-33b
(27 sentences)

Sequence

1337 reads, 45 reads per million, 73 experiments

gcgggcggccccgcgGUGCAUUGCUGUUGCAUUGCaugugugaggcaggugcagugccucggcagugcagcccggagccggccccuggcaccgc
((((.((((.(((.((((((((((((..(((((((((.(((...))).)))))))))..)))))))))).))))).))))(((...))).))))

Structure

    ---------g    c   c  -          UU         g   g 
gcgg          cggc ccg gG UGCAUUGCUG  GCAUUGCau ugu  
||||          |||| ||| || ||||||||||  ||||||||| ||| a
cgcc          gccg ggc cc acgugacggc  cgugacgug acg  
    acgguccccg    a   -  g          uc         g   g 

Annotation confidence Not enough data

Genome context

chr19: 35416499-35416592 [+]

Mature bta-miR-33b

• Accession: MIMAT0009295
• Description: Bos taurus bta-miR-33b mature miRNA
• Sequence: 16 - GUGCAUUGCUGUUGCAUUGC - 35
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125