Stem-loop bta-mir-365-2

Accession

MI0009812

Description

Bos taurus bta-mir-365-2 precursor miRNA mir-365

Gene
family

RF00659; mir-365

Literature search

7 open access papers mention bta-mir-365-2
(20 sentences)

Sequence

511696 reads, 204.0 reads per million, 320 experiments

agagugcucgaggacagcaagaaaaaugAGGGACUUUCAGGGGCAGCUGUGuuuucugacucagucaUAAUGCCCCUAAAAAUCCUUAUuguucuugcagugugcaucagg
...((((....(.((.(((((((.((((((((..(((.(((((((((((.(((....))).)))).....))))))).))).)))))))).))))))).)).)))))....

Structure

-aga    ucga g  a       a        AC   C       -----    U   u 
    gugc    g ac gcaagaa aaugAGGG  UUU AGGGGCA     GCUG Guu u
    ||||    | || ||||||| ||||||||  ||| |||||||     |||| |||  
    uacg    u ug cguucuu uUAUUCCU  AAA UCCCCGU     ugac cag c
ggac    ---- g  a       g        -A   A       AAUac    u   u 

Annotation confidence High

Genome context

19: 18461502-18461612 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-365-2

Mature bta-miR-365-2-5p

• Accession: MIMAT0050857
• Description: Bos taurus bta-miR-365-2-5p mature miRNA
• Sequence: 29 - AGGGACUUUCAGGGGCAGCUGUG - 51
• Evidence: experimental ; Illumina [3]

Mature bta-miR-365-3p

• Accession: MIMAT0004341
• Description: Bos taurus bta-miR-365-3p mature miRNA
• Sequence: 68 - UAAUGCCCCUAAAAAUCCUUAU - 89
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125