Stem-loop bta-mir-135b

Accession

MI0009738

Description

Bos taurus bta-mir-135b precursor miRNA

Literature search

6 open access papers mention bta-mir-135b
(15 sentences)

Sequence

12 reads, 1 reads per million, 11 experiments

cucugcuguggccUAUGGCUUUUCAUUCCUAUGUGAuuacuguuccaaacucauguagggcuaaaagccaugggcuacagugaggggcgcgcgcc
(((.(((((((((((((((((((...((((((((((..............))))))))))..)))))))))))))))))))))).(((....)))

Structure

-----------   u                   CAU          uuacug 
           cuc gcuguggccUAUGGCUUUU   UCCUAUGUGA      u
           ||| |||||||||||||||||||   ||||||||||       
           gag ugacaucggguaccgaaaa   gggauguacu      u
ccgcgcgcggg   -                   -uc          caaacc 

Annotation confidence Not enough data

Genome context

chr16: 3040637-3040731 [-]

Mature bta-miR-135b

• Accession: MIMAT0009229
• Description: Bos taurus bta-miR-135b mature miRNA
• Sequence: 14 - UAUGGCUUUUCAUUCCUAUGUGA - 36
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125