Stem-loop bta-mir-217

Accession

MI0009779

Description

Bos taurus bta-mir-217 precursor miRNA

Literature search

3 open access papers mention bta-mir-217
(3 sentences)

Sequence

38 reads, 2 reads per million, 10 experiments

aauauaauuaacacagaguuuuugaugucgcagaUACUGCAUCAGGAACUGAUUGGAUaagaaucggucaccaucaguuccucaugcauugccuucagcaucuaaacaag
.................((((..(((((.(.((.((.(((((.((((((((((.((((........))).).)))))))))).))))).)).)).).))))).))))...

Structure

aauauaauuaacacaga    uu     c c  a  C     C          U -   aag 
                 guuu  gaugu g ag UA UGCAU AGGAACUGAU G GAU   a
                 ||||  ||||| | || || ||||| |||||||||| | |||    
                 caaa  cuacg c uc gu acgua uccuugacua c cug   a
--------------gaa    -u     a u  c  u     c          c a   gcu 

Annotation confidence Not enough data

Genome context

chr11: 38641311-38641420 [-]

Mature bta-miR-217

• Accession: MIMAT0009267
• Description: Bos taurus bta-miR-217 mature miRNA
• Sequence: 35 - UACUGCAUCAGGAACUGAUUGGAU - 58
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125