Stem-loop bta-mir-181d

Accession

MI0009754

Description

Bos taurus bta-mir-181d precursor miRNA

Literature search

38 open access papers mention bta-mir-181d
(65 sentences)

Sequence

320313 reads, 100.0 reads per million, 317 experiments

uccccucccuuaggccacagcgaaggucacaaucAACAUUCAUUGUUGUCGGUGGGUUgugacagagaccagaCCCACCGAGGGAUGAAUGUCAcuguggcugggccagacac
............((((.((((......((((....(((((((((....((((((((((.((........))))))))))))..)))))))))...))))))))))))......

Structure

uccccucccuua    a    gaaggu    aucA         GUUG          g  aca 
            ggcc cagc      caca    ACAUUCAUU    UCGGUGGGUU ug   g
            |||| ||||      ||||    |||||||||    |||||||||| ||    
            ccgg gucg      gugu    UGUAAGUAG    AGCCACCCag ac   a
------cacaga    -    ------    -cAC         --GG          -  cag 

Annotation confidence High

Genome context

7: 11811275-11811387 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-181d

Mature bta-miR-181d-5p

• Accession: MIMAT0009243
• Description: Bos taurus bta-miR-181d-5p mature miRNA
• Sequence: 35 - AACAUUCAUUGUUGUCGGUGGGUU - 58
• Evidence: not_experimental

Mature bta-miR-181d-3p

• Accession: MIMAT0050824
• Description: Bos taurus bta-miR-181d-3p mature miRNA
• Sequence: 74 - CCCACCGAGGGAUGAAUGUCA - 94
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125