Stem-loop bta-mir-665

Accession

MI0009885

Description

Bos taurus bta-mir-665 precursor miRNA

Literature search

9 open access papers mention bta-mir-665
(35 sentences)

Sequence

46920 reads, 33.0 reads per million, 310 experiments

ucuccuugAGGGGUCUUGGCCUCUGCCCAggacucuuucaugACCAGUAGGCCGAGGCCCCUCAcaggcggc
.(.((((((((((((((((((((((..(((((....))).))..))).)))))))))))))))).))).)..

Structure

-u u   -                -   CC  -   c 
  c ccu ugAGGGGUCUUGGCCU CUG  CA gga u
  | ||| |||||||||||||||| |||  || |||  
  g gga ACUCCCCGGAGCCGGA GAC  gu cuu c
cg c   c                U   CA  a   u 

Annotation confidence High

Genome context

21: 65774396-65774467 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-665

Mature bta-miR-665-5p

• Accession: MIMAT0050885
• Description: Bos taurus bta-miR-665-5p mature miRNA
• Sequence: 9 - AGGGGUCUUGGCCUCUGCCCA - 29
• Evidence: not_experimental

Mature bta-miR-665-3p

• Accession: MIMAT0009363
• Description: Bos taurus bta-miR-665-3p mature miRNA
• Sequence: 43 - ACCAGUAGGCCGAGGCCCCUCA - 64
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125