Stem-loop bta-mir-329a

Accession

MI0009801

Description

Bos taurus bta-mir-329a precursor miRNA

Literature search

3 open access papers mention bta-mir-329a
(3 sentences)

Sequence

26461 reads, 14.0 reads per million, 283 experiments

gugguacuugaggaGAGGUUUUCUAGGUCUCUGUUUcuuucaugaggaugaAACACACCUGGUUAACCUUUUUuccaguauca
.(((((((.(((((((((((..((((((...((((((.(((....))).)))))).))))))..))))))))))).)))))))

Structure

g       u           UU      CUC      u   a 
 ugguacu gaggaGAGGUU  CUAGGU   UGUUUc uuc u
 ||||||| |||||||||||  ||||||   |||||| |||  
 acuauga cuUUUUUCCAA  GGUCCA   ACAAag agg g
-       c           UU      --C      u   a 

Annotation confidence High

Genome context

21: 65917454-65917536 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from bta-mir-329a

Mature bta-miR-329a-5p

• Accession: MIMAT0050851
• Description: Bos taurus bta-miR-329a-5p mature miRNA
• Sequence: 15 - GAGGUUUUCUAGGUCUCUGUUU - 36
• Evidence: not_experimental

Mature bta-miR-329a-3p

• Accession: MIMAT0009288
• Description: Bos taurus bta-miR-329a-3p mature miRNA
• Sequence: 52 - AACACACCUGGUUAACCUUUUU - 73
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125