Stem-loop bta-mir-328

Accession

MI0009800

Description

Bos taurus bta-mir-328 precursor miRNA

Literature search

2 open access papers mention bta-mir-328
(4 sentences)

Sequence

475 reads, 23 reads per million, 67 experiments

cuguuucggagccuggagcgggggggcaggaggggcucagggagauagugugugcugcccCUGGCCCUCUCUGCCCUUCCGUccccuguucc
.......(((((..((.(((((((((((((.(((((.(((((.(.((((....))))))))))))))).))))))))))))).))..)))))

Structure

cuguuuc     cu  a             a     u     a a    g 
       ggagc  gg gcgggggggcagg ggggc caggg g uagu u
       |||||  || ||||||||||||| ||||| ||||| | ||||  
       ccuug  cc UGCCUUCCCGUCU UCCCG GUCcc c gucg g
-------     uc  c             C     -     - -    u 

Annotation confidence Not enough data

Genome context

chr18: 35062240-35062331 [-]

Mature bta-miR-328

• Accession: MIMAT0009287
• Description: Bos taurus bta-miR-328 mature miRNA
• Sequence: 61 - CUGGCCCUCUCUGCCCUUCCGU - 82
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125