Stem-loop bta-mir-505

Accession

MI0009856

Description

Bos taurus bta-mir-505 precursor miRNA

Literature search

1 open access papers mention bta-mir-505
(1 sentences)

Sequence

1168 reads, 48 reads per million, 70 experiments

aaauugaugcacccagugggggagccaggaaguauugauguuucuaccaguuuagCGUCAACACUUGCUGGUUUCCUcucuggagcguca
....((((((..((((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).)))).))))))

Structure

aaau      ac    u           g    a        ucua 
    ugaugc  ccag gggggagccag aagu uugauguu    c
    ||||||  |||| ||||||||||| |||| ||||||||    c
    acugcg  gguc cUCCUUUGGUC UUCA AACUGCga    a
----      -a    u           G    C        uuug 

Annotation confidence Not enough data

Genome context

chrX: 23507268-23507357 [-]

Mature bta-miR-505

• Accession: MIMAT0009341
• Description: Bos taurus bta-miR-505 mature miRNA
• Sequence: 56 - CGUCAACACUUGCUGGUUUCCU - 77
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125