Stem-loop bta-mir-196a-2

Accession

MI0009766

Description

Bos taurus bta-mir-196a-2 precursor miRNA

Gene family

MIPF0000031; mir-196

Literature search

21 open access papers mention bta-mir-196a-2
(108 sentences)

Sequence

3446 reads, 96 reads per million, 42 experiments

agcugaucuguggcuUAGGUAGUUUCAUGUUGUUGGGauugaguuuugaacucggcaacaagaaacugccugaguuacaucaguc
.(((((..((((((((((((((((((.((((((((((.((........)))))))))))).))))))))))))))))))))))).

Structure

a     uc                  A          a  gag 
 gcuga  uguggcuUAGGUAGUUUC UGUUGUUGGG uu   u
 |||||  |||||||||||||||||| |||||||||| ||    
 ugacu  acauugaguccgucaaag acaacggcuc aa   u
c     --                  a          -  guu 

Annotation confidence High

Genome context

chr5: 26246499-26246583 [-]

Mature bta-miR-196a

• Accession: MIMAT0009255
• Description: Bos taurus bta-miR-196a mature miRNA
• Sequence: 16 - UAGGUAGUUUCAUGUUGUUGGG - 37
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125