Stem-loop bta-mir-124b

Accession

MI0009726

Description

Bos taurus bta-mir-124b precursor miRNA

Literature search

10 open access papers mention bta-mir-124b
(14 sentences)

Sequence

135555 reads, 526.0 reads per million, 203 experiments

ugagggccccucugCGUGUUCACAGCGGACCUUGAUUuaaugucuauacaauUAAGGCACGCGGUGAAUGCCAAGagaggcgccucc
.(((((((.((((..((((((((.(((..((((((((............))))))))..))).))))))))..)))).))).)))).

Structure

u    -   c    gC        A   GA        uaaug 
 gagg gcc cucu  GUGUUCAC GCG  CCUUGAUU     u
 |||| ||| ||||  |||||||| |||  ||||||||      
 cucc cgg gaGA  CGUAAGUG CGC  GGAAUuaa     c
c    g   a    AC        G   AC        cauau 

Annotation confidence High

Comments

This sequence was mis-named bta-mir-104-3 in [1].

Genome context

13: 54355340-54355426 [-]

Mature bta-miR-124b-5p

• Accession: MIMAT0050811
• Description: Bos taurus bta-miR-124b-5p mature miRNA
• Sequence: 15 - CGUGUUCACAGCGGACCUUGAUU - 37
• Evidence: experimental ; cloned [2], Array [3], qRT-PCR [3]

Mature bta-miR-124b-3p

• Accession: MIMAT0013774
• Description: Bos taurus bta-miR-124b-3p mature miRNA
• Sequence: 53 - UAAGGCACGCGGUGAAUGCCAAG - 75
• Evidence: experimental ; cloned [2], Array [3], qRT-PCR [3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125