Stem-loop bta-mir-452

Accession

MI0009838

Description

Bos taurus bta-mir-452 precursor miRNA

Gene family

MIPF0000287; mir-452

Literature search

1 open access papers mention bta-mir-452
(1 sentences)

Sequence

18379 reads, 411 reads per million, 66 experiments

gcuaagcacuuacaacUGUUUGCAGAGGAAACUGAGACuuuguaacuauaucucagucucaucugcaaagaaguaagugcuuugc
((.((((((((((...(.((((((((.((.(((((((..(.......)..))))))).)).)))))))).).)))))))))).))

Structure

  u          aac G        G  A       Cu ug 
gc aagcacuuac   U UUUGCAGA GA ACUGAGA  u  u
|| ||||||||||   | |||||||| || |||||||  |  a
cg uucgugaaug   a aaacgucu cu ugacucu  a  a
  u          --a g        a  c       au uc 

Annotation confidence High

Genome context

chrX: 34882394-34882478 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-452

Mature bta-miR-452

• Accession: MIMAT0009324
• Description: Bos taurus bta-miR-452 mature miRNA
• Sequence: 17 - UGUUUGCAGAGGAAACUGAGAC - 38
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125