Stem-loop bta-mir-582

Accession

MI0009867

Description

Bos taurus bta-mir-582 precursor miRNA

Literature search

17 open access papers mention bta-mir-582
(154 sentences)

Sequence

7999 reads, 7.0 reads per million, 280 experiments

aucuguucucuuuggUUACAGUUGUUCAACCAGUUACUaaucuaccuaauugUAACCAGUUGAACAACUGAACCcaaagggugcaaagugaaaacauu
...(((.((((((((...((((((((((((..(((((..............)))))..))))))))))))...)))))))).))).............

Structure

----------auc   u        UUA            CA     Uaaucu 
             ugu cucuuugg   CAGUUGUUCAAC  GUUAC      a
             ||| ||||||||   ||||||||||||  |||||       
             acg gggaaacC   GUCAACAAGUUG  CAAUg      c
uuacaaaagugaa   u        CAA            AC     uuaauc 

Annotation confidence High

Genome context

20: 19584382-19584479 [+]

Mature bta-miR-582-5p

• Accession: MIMAT0009351
• Description: Bos taurus bta-miR-582-5p mature miRNA
• Sequence: 16 - UUACAGUUGUUCAACCAGUUACU - 38
• Evidence: not_experimental

Mature bta-miR-582-3p

• Accession: MIMAT0061026
• Description: Bos taurus bta-miR-582-3p mature miRNA
• Sequence: 53 - UAACCAGUUGAACAACUGAACC - 74
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125