Stem-loop bta-mir-658

Accession

MI0009884

Description

Bos taurus bta-mir-658 precursor miRNA

Literature search

5 open access papers mention bta-mir-658
(8 sentences)

Sequence

3291 reads, 17.0 reads per million, 210 experiments

cccgguugccgugguugcaggcccggcccgccagcuuguccgcugacagcgagccauuagGGCGGAGGGAAGCGGGUCCGUUGGUccuucaggcacgagg
.........((((.(((.(((((((((((((...((..((((((................))))))))...))))).)))..)).))).))).))))...

Structure

cccgguugc    g   c   -  --   -     cag  ug      gacagcg 
         cgug uug agg cc  cgg cccgc   cu  uccgcu       a
         |||| ||| ||| ||  ||| |||||   ||  ||||||        
         gcac gac ucc GG  GCC GGGCG   GG  AGGCGG       g
------gga    g   u   U  UU   U     AAG  --      gauuacc 

Annotation confidence Not enough data

Genome context

5: 109653907-109654006 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-658

Mature bta-miR-658-3p

• Accession: MIMAT0009362
• Description: Bos taurus bta-miR-658-3p mature miRNA
• Sequence: 61 - GGCGGAGGGAAGCGGGUCCGUUGGU - 85
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125