Stem-loop bta-mir-656

Accession

MI0009883

Description

Bos taurus bta-mir-656 precursor miRNA

Literature search

3 open access papers mention bta-mir-656
(4 sentences)

Sequence

8834 reads, 7.0 reads per million, 219 experiments

cugaaauAGGUUGCCUGUGAGGUGUUCAcuuuucuaagcgaugAAUAUUAUACAGUCAACCUCUuuccgauaucgaauc
..((((.((((((.(((((.(((((((((((....)))...)))))))).))))).)))))).))))............

Structure

----------cu    u      C     A        ---   u 
            gaaa AGGUUG CUGUG GGUGUUCA   cuu u
            |||| |||||| ||||| ||||||||   |||  
            cuuU UCCAAC GACAU UUAUAAgu   gaa c
cuaagcuauagc    C      U     A        agc   u 

Annotation confidence High

Genome context

21: 65955335-65955413 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from bta-mir-656

Mature bta-miR-656-5p

• Accession: MIMAT0050884
• Description: Bos taurus bta-miR-656-5p mature miRNA
• Sequence: 8 - AGGUUGCCUGUGAGGUGUUCA - 28
• Evidence: not_experimental

Mature bta-miR-656-3p

• Accession: MIMAT0009361
• Description: Bos taurus bta-miR-656-3p mature miRNA
• Sequence: 44 - AAUAUUAUACAGUCAACCUCU - 64
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125