Stem-loop bta-mir-1179

Accession

MI0010459

Description

Bos taurus bta-mir-1179 precursor miRNA

Literature search

6 open access papers mention bta-mir-1179
(7 sentences)

Sequence

11 reads, 0.0 reads per million, 8 experiments

ggccagaagggaagAAGCAUUCUUUCAUUGGUUGGuguauguugccuugucaaccaaucagaggaugccauuuauccuuuucugacuagc
((.(((((((((.((((((((((((.(((((((((..............))))))))).)))))))))..))).))).)))))).))...

Structure

---  c      -   a   --         C         uguaug 
   gg cagaag gga gAA  GCAUUCUUU AUUGGUUGG      u
   || |||||| ||| |||  ||||||||| |||||||||       
   uc gucuuu ccu uuu  cguaggaga uaaccaacu      u
cga  a      u   a   ac         c         guuccg 

Annotation confidence Not enough data

Genome context

21: 19578835-19578924 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-1179

Mature bta-miR-1179-5p

• Accession: MIMAT0009957
• Description: Bos taurus bta-miR-1179-5p mature miRNA
• Sequence: 15 - AAGCAUUCUUUCAUUGGUUGG - 35
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125