Stem-loop bta-mir-1179

Accession

MI0010459

Description

Bos taurus bta-mir-1179 precursor miRNA

Literature search

1 open access papers mention bta-mir-1179
(1 sentences)

Sequence

4 reads, 1 reads per million, 2 experiments

ggccagaagggaagAAGCAUUCUUUCAUUGGUUGGuguauguugccuugucaaccaaucagaggaugccauuuauccuuuucugacuagc
((.(((((((((.((((((((((((.(((((((((..............))))))))).)))))))))..))).))).)))))).))...

Structure

---  c      -   a   --         C         uguaug 
   gg cagaag gga gAA  GCAUUCUUU AUUGGUUGG      u
   || |||||| ||| |||  ||||||||| |||||||||       
   uc gucuuu ccu uuu  cguaggaga uaaccaacu      u
cga  a      u   a   ac         c         guuccg 

Annotation confidence Not enough data

Genome context

chr21: 20044885-20044974 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-1179

Mature bta-miR-1179

• Accession: MIMAT0009957
• Description: Bos taurus bta-miR-1179 mature miRNA
• Sequence: 15 - AAGCAUUCUUUCAUUGGUUGG - 35
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125