Stem-loop bta-mir-155

Accession

MI0009752

Description

Bos taurus bta-mir-155 precursor miRNA mir-155

Gene
family

RF00731; mir-155

Literature search

477 open access papers mention bta-mir-155
(2951 sentences)

Sequence

2746446 reads, 557.0 reads per million, 319 experiments

ugUUAAUGCUAAUCGUGAUAGGGGUuuuuaccucggacugaCUCCUACAUGUUAGCAUUAACA
((((((((((((.((((.((((((((....(....)...))))))))))))))))))))))))

Structure

            U    A        uuua c 
ugUUAAUGCUAA CGUG UAGGGGUu    c u
|||||||||||| |||| ||||||||    |  
ACAAUUACGAUU GUAC AUCCUCag    g c
            -    -        -uca g 

Annotation confidence High

Genome context

1: 10848650-10848712 [-]

Mature bta-miR-155-5p

• Accession: MIMAT0009241
• Description: Bos taurus bta-miR-155-5p mature miRNA
• Sequence: 3 - UUAAUGCUAAUCGUGAUAGGGGU - 25
• Evidence: not_experimental

Mature bta-miR-155-3p

• Accession: MIMAT0050823
• Description: Bos taurus bta-miR-155-3p mature miRNA
• Sequence: 42 - CUCCUACAUGUUAGCAUUAACA - 63
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125