Stem-loop bta-mir-101-1

Accession

MI0009721

Description

Bos taurus bta-mir-101-1 precursor miRNA mir-101

Gene
family

RF00253; mir-101

Literature search

17 open access papers mention bta-mir-101-1
(38 sentences)

Sequence

31201731 reads, 10118.0 reads per million, 321 experiments

aggcugcccuggcUCAGUUAUCACAGUGCUGAUGCUGuccauucuaaaggUACAGUACUGUGAUAACUGAAGgauggcagcca
.(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))))).

Structure

a       cuggc                  A    Gucca 
 ggcugcc     UCAGUUAUCACAGUGCUG UGCU     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uagGA                  -    aaauc 

Annotation confidence High

Genome context

3: 80335436-80335518 [+]

Mature bta-miR-101-1-5p

• Accession: MIMAT0062439
• Description: Bos taurus bta-miR-101-1-5p mature miRNA
• Sequence: 14 - UCAGUUAUCACAGUGCUGAUGCUG - 37
• Evidence: experimental ; Illumina [1]

Mature bta-miR-101-3p

• Accession: MIMAT0003520
• Description: Bos taurus bta-miR-101-3p mature miRNA
• Sequence: 51 - UACAGUACUGUGAUAACUGAAG - 72
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125