Stem-loop bta-mir-101-1

Accession

MI0009721

Description

Bos taurus bta-mir-101-1 precursor miRNA mir-101

Gene
family

RF00253; mir-101

Literature search

13 open access papers mention bta-mir-101-1
(33 sentences)

Sequence

111024 reads, 984 reads per million, 76 experiments

aggcugcccuggcucaguuaucacagugcugaugcuguccauucuaaaggUACAGUACUGUGAUAACUGAAggauggcagcca
.(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))))).

Structure

a       cuggc                  a    gucca 
 ggcugcc     ucaguuaucacagugcug ugcu     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uaggA                  -    aaauc 

Annotation confidence High

Genome context

chr3: 80980185-80980267 [+]

Mature bta-miR-101

• Accession: MIMAT0003520
• Description: Bos taurus bta-miR-101 mature miRNA
• Sequence: 51 - UACAGUACUGUGAUAACUGAA - 71
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125