Stem-loop bta-mir-29e

Accession

MI0010454

Description

Bos taurus bta-mir-29e precursor miRNA

Literature search

26 open access papers mention bta-mir-29e
(81 sentences)

Sequence

7965 reads, 4.0 reads per million, 270 experiments

cuucuggaagCUGGUUUCACAUGGUGGCUUAGAUuuuuccaucuuuguaucUAGCAUCAUUUGAAAUCAGUGUUuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure

         -          C      G  U    uuuucc 
cuucuggaa gCUGGUUUCA AUGGUG CU AGAU      a
||||||||| |||||||||| |||||| || ||||       
gaggauuUU UGACUAAAGU UACUAC GA Ucua      u
         G          U      -  -    uguuuc 

Annotation confidence High

Genome context

16: 75577046-75577126 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-29e

Mature bta-miR-29e-5p

• Accession: MIMAT0050898
• Description: Bos taurus bta-miR-29e-5p mature miRNA
• Sequence: 11 - CUGGUUUCACAUGGUGGCUUAGAU - 34
• Evidence: not_experimental

Mature bta-miR-29e-3p

• Accession: MIMAT0009953
• Description: Bos taurus bta-miR-29e-3p mature miRNA
• Sequence: 52 - UAGCAUCAUUUGAAAUCAGUGUU - 74
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125