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miRBase entry: bta-mir-1281
Wordcloud for bta-mir-1281
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How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Stem-loop
bta-mir-1281
Accession
MI0010466
Description
Bos taurus
bta-mir-1281 precursor miRNA
Literature search
5 open access papers
mention bta-mir-1281
(33 sentences)
Sequence
agggggcaccgggaggaggugagugucucuugUCGCCUCCUCCUCUCCCcgcuu
..((((....((((((((((((..........))))))))))))..))))....
Structure
--ag cacc gugu gggg gggaggagguga c |||| |||||||||||| cCCC UCCUCCUCCGCU u uucg --UC guuc
Annotation confidence
Not enough data
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Genome context
chr5: 113137849-113137902 [+]
Database links
Mature
bta-miR-1281
Accession
MIMAT0009962
Description
Bos taurus
bta-miR-1281 mature miRNA
Sequence
33 - UCGCCUCCUCCUCUCCC - 49
Evidence
not_experimental
References
PubMed ID:
18945293
Annotation of 390 bovine miRNA genes by sequence similarity with other species
"Strozzi F, Mazza R, Malinverni R, Williams JL"
"Anim Genet (2009) 40:125