Stem-loop bta-mir-134

Accession

MI0009735

Description

Bos taurus bta-mir-134 precursor miRNA

Literature search

2 open access papers mention bta-mir-134
(10 sentences)

Sequence

155 reads, 2 reads per million, 42 experiments

cagggugUGUGACUGGUUGACCAGAGUGGccagcacucgguucacccucugggccaccuagucaccaacccuc
.(((((..((((((((.((.((((((.((..(((.....)))..))))))))..)).))))))))..))))).

Structure

c     gU        U  -A      U  cc   a 
 agggu  GUGACUGG UG  CCAGAG GG  agc c
 |||||  |||||||| ||  |||||| ||  ||| u
 uccca  cacugauc ac  ggucuc cc  uug c
c     ac        c  cg      -  ac   g 

Annotation confidence High

Genome context

chr21: 67871630-67871702 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from bta-mir-134

Mature bta-miR-134

• Accession: MIMAT0009227
• Description: Bos taurus bta-miR-134 mature miRNA
• Sequence: 8 - UGUGACUGGUUGACCAGAGUGG - 29
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125