Stem-loop bta-mir-134

Accession

MI0009735

Description

Bos taurus bta-mir-134 precursor miRNA

Literature search

58 open access papers mention bta-mir-134
(133 sentences)

Sequence

69669 reads, 27.0 reads per million, 278 experiments

cagggUGUGUGACUGGUUGACCAGAGUGgccagcacucgguucacccUCUGGGCCACCUAGUCACCAACccuc
.(((((..((((((((.((.((((((.((..(((.....)))..))))))))..)).))))))))..))))).

Structure

c     GU        U  -A      U  cc   a 
 agggU  GUGACUGG UG  CCAGAG Gg  agc c
 |||||  |||||||| ||  |||||| ||  ||| u
 uccCA  CACUGAUC AC  GGUCUc cc  uug c
c     AC        C  CG      -  ac   g 

Annotation confidence High

Genome context

21: 65943904-65943976 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from bta-mir-134

Mature bta-miR-134-5p

• Accession: MIMAT0009227
• Description: Bos taurus bta-miR-134-5p mature miRNA
• Sequence: 6 - UGUGUGACUGGUUGACCAGAGUG - 28
• Evidence: not_experimental

Mature bta-miR-134-3p

• Accession: MIMAT0060983
• Description: Bos taurus bta-miR-134-3p mature miRNA
• Sequence: 48 - UCUGGGCCACCUAGUCACCAAC - 69
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125