Stem-loop bta-mir-212

Accession

MI0009776

Description

Bos taurus bta-mir-212 precursor miRNA mir-132

Gene
family

RF00662; mir-132

Literature search

56 open access papers mention bta-mir-212
(532 sentences)

Sequence

29216 reads, 43.0 reads per million, 307 experiments

cggagccacccugcccgggcagcgcgccggcACCUUGGCUCUAGACUGCUUACUgcccgggccgcccucagUAACAGUCUCCAGUCACGGCCAccgacgccuggccccgcc
.((.((......))))((((((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).))))).))))....

Structure

cggagccacccugccc    -  c   c   -cA  U     CU      C      ccc   c 
                gggc ag gcg cgg   CC UGGCU  AGACUG UUACUg   ggg  
                |||| || ||| |||   || |||||  |||||| ||||||   ||| c
                cccg uc cgc gcc   GG ACUGA  UCUGAC AAUgac   ccc  
------------ccgc    g  -   a   ACC  C     CC      -      --u   g 

Annotation confidence High

Genome context

19: 23071137-23071247 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-212

Mature bta-miR-212-5p

• Accession: MIMAT0009264
• Description: Bos taurus bta-miR-212-5p mature miRNA
• Sequence: 32 - ACCUUGGCUCUAGACUGCUUACU - 54
• Evidence: not_experimental

Mature bta-miR-212-3p

• Accession: MIMAT0050833
• Description: Bos taurus bta-miR-212-3p mature miRNA
• Sequence: 72 - UAACAGUCUCCAGUCACGGCCA - 93
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125