Stem-loop bta-mir-1249

Accession

MI0010481

Description

Bos taurus bta-mir-1249 precursor miRNA mir-1249

Gene
family

RF01918; mir-1249

Literature search

11 open access papers mention bta-mir-1249
(21 sentences)

Sequence

27876 reads, 30.0 reads per million, 319 experiments

gggAGGAGGGAGGAGAUGGGCCACGUUCccucugccuggaACGCCCUUCCCCCCCUUCUUCAccu
.(((((((((.((.((.((((...(((((........))))))))).)).)))))))))))....

Structure

---g         A  A  U    CAC     cuc 
    ggAGGAGGG GG GA GGGC   GUUCc   u
    ||||||||| || || ||||   |||||    
    CUUCUUCCC CC CU CCCG   CAagg   g
uccA         -  C  U    ---     ucc 

Annotation confidence High

Genome context

5: 115620092-115620156 [-]

Mature bta-miR-1249-5p

• Accession: MIMAT0050908
• Description: Bos taurus bta-miR-1249-5p mature miRNA
• Sequence: 4 - AGGAGGGAGGAGAUGGGCCACGUUC - 28
• Evidence: not_experimental

Mature bta-miR-1249-3p

• Accession: MIMAT0009976
• Description: Bos taurus bta-miR-1249-3p mature miRNA
• Sequence: 41 - ACGCCCUUCCCCCCCUUCUUCA - 62
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125