Stem-loop bta-mir-1185

Accession

MI0010478

Description

Bos taurus bta-mir-1185 precursor miRNA

Literature search

5 open access papers mention bta-mir-1185
(14 sentences)

Sequence

28412 reads, 19.0 reads per million, 289 experiments

uuugguacuugaagAGAGGAUACCCUUUGUAUGUUCacuuuauuaauggcgaAUAUACAGAGGGAGACUCUUAUUugcguaucaaa
.(((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))).

Structure

u       u    -     GA A              a  uua 
 uugguac ugaa gAGAG  U CCCUUUGUAUGUUC cu   u
 ||||||| |||| |||||  | |||||||||||||| ||    
 aacuaug guUU UUCUC  A GGGAGACAUAUAag gg   u
a       c    A     AG -              c  uaa 

Annotation confidence High

Genome context

21: 65932006-65932091 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-1185

Mature bta-miR-1185-5p

• Accession: MIMAT0009973
• Description: Bos taurus bta-miR-1185-5p mature miRNA
• Sequence: 15 - AGAGGAUACCCUUUGUAUGUUC - 36
• Evidence: experimental ; cloned [2]

Mature bta-miR-1185-3p

• Accession: MIMAT0061037
• Description: Bos taurus bta-miR-1185-3p mature miRNA
• Sequence: 53 - AUAUACAGAGGGAGACUCUUAUU - 75
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125