Stem-loop bta-mir-135a-2

Accession

MI0009736

Description

Bos taurus bta-mir-135a-2 precursor miRNA

Literature search

8 open access papers mention bta-mir-135a-2
(25 sentences)

Sequence

12058 reads, 22.0 reads per million, 233 experiments

agauaaauucacucuagugcuuUAUGGCUUUUUAUUCCUAUGUGAuaguaauaaagucucaUGUAGGGAUGGAAGCCAUGAAauacauugugaaaaauca
.(((...(((((....(((.((((((((((((.((((((((((((.(.(.....).).)))))))))))))))))))))))).)))...)))))..))).

Structure

a   aaa     ucua   c            U            u g a 
 gau   uucac    gug uuUAUGGCUUUU AUUCCUAUGUGA a u a
 |||   |||||    ||| |||||||||||| |||||||||||| | | u
 cua   aagug    cau AAGUACCGAAGG UAGGGAUGUacu u a a
a   -aa     -uua   a            -            c g a 

Annotation confidence High

Genome context

5: 61775955-61776054 [+]

Mature bta-miR-135a-5p

• Accession: MIMAT0009228
• Description: Bos taurus bta-miR-135a-5p mature miRNA
• Sequence: 23 - UAUGGCUUUUUAUUCCUAUGUGA - 45
• Evidence: not_experimental

Mature bta-miR-135a-2-3p

• Accession: MIMAT0050814
• Description: Bos taurus bta-miR-135a-2-3p mature miRNA
• Sequence: 62 - UGUAGGGAUGGAAGCCAUGAA - 82
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125