Stem-loop bta-mir-655

Accession

MI0009882

Description

Bos taurus bta-mir-655 precursor miRNA

Literature search

9 open access papers mention bta-mir-655
(38 sentences)

Sequence

62655 reads, 31.0 reads per million, 276 experiments

aacuguucagggauauuugaggAGAGGUUAUCCGUGUUAUGUUCgcuuggcucaucaugaAUAAUACAUGGUUAACCUCUCUuugaauaucagacuc
...........(((((((((((((((((((.((((((..((((((..((......))))))))..)))))).)))))))))))))))))))......

Structure

aacuguucagg                   U      UA      cu  gc 
           gauauuugaggAGAGGUUA CCGUGU  UGUUCg  ug  u
           ||||||||||||||||||| ||||||  ||||||  ||   
           cuauaaguuUCUCUCCAAU GGUACA  AUAagu  ac  c
-----cucaga                   U      UA      --  ua 

Annotation confidence High

Genome context

21: 65937962-65938058 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from bta-mir-655

Mature bta-miR-655-5p

• Accession: MIMAT0050883
• Description: Bos taurus bta-miR-655-5p mature miRNA
• Sequence: 23 - AGAGGUUAUCCGUGUUAUGUUC - 44
• Evidence: not_experimental

Mature bta-miR-655-3p

• Accession: MIMAT0009360
• Description: Bos taurus bta-miR-655-3p mature miRNA
• Sequence: 61 - AUAAUACAUGGUUAACCUCUCU - 82
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125