Stem-loop bta-mir-302b

Accession

MI0009793

Description

Bos taurus bta-mir-302b precursor miRNA

Literature search

22 open access papers mention bta-mir-302b
(166 sentences)

Sequence

5360 reads, 5.0 reads per million, 97 experiments

cucccuuuaACUUUAACAUGGUAGUACUUUCUGugacuuuugaaauagUAAGUGCUUCCAUGUUUUAGUAGaagu
....((((.(((..(((((((.(((((((.((((..(....)..)))).))))))).)))))))..))).)))).

Structure

cucc    a   UU       U       U    ga u 
    cuuu ACU  AACAUGG AGUACUU CUGu  c u
    |||| |||  ||||||| ||||||| ||||  |  
    gaaG UGA  UUGUACC UCGUGAA gaua  g u
---u    A   UU       U       U    aa u 

Annotation confidence High

Genome context

6: 12980214-12980288 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from bta-mir-302b

Mature bta-miR-302b-5p

• Accession: MIMAT0050845
• Description: Bos taurus bta-miR-302b-5p mature miRNA
• Sequence: 10 - ACUUUAACAUGGUAGUACUUUCUG - 33
• Evidence: not_experimental

Mature bta-miR-302b-3p

• Accession: MIMAT0009280
• Description: Bos taurus bta-miR-302b-3p mature miRNA
• Sequence: 49 - UAAGUGCUUCCAUGUUUUAGUAG - 71
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125