Stem-loop bta-mir-502b

Accession

MI0009854

Description

Bos taurus bta-mir-502b precursor miRNA

Literature search

3 open access papers mention bta-mir-502b
(6 sentences)

Sequence

15209 reads, 8.0 reads per million, 314 experiments

gcuccccucucUAAUUCUUGCUCCCCAGGUGAGAGUgcuuugugaaugcaaUCCACCUGGGCAAGGAUUCUGAaugugagagc
((((.((..((.(((((((((...(((((((.((.(((.........))).))))))))))))))))))..))..).).))))

Structure

    c - uc  -U         UCC       A  G   uuu 
gcuc c c  uc  AAUUCUUGC   CCAGGUG GA Ugc   g
|||| | |  ||  |||||||||   ||||||| || |||   u
cgag g g  AG  UUAGGAACG   GGUCCAC CU acg   g
    a u ua  UC         ---       -  a   uaa 

Annotation confidence High

Genome context

X: 87736180-87736262 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-502b

Mature bta-miR-502b-5p

• Accession: MIMAT0050875
• Description: Bos taurus bta-miR-502b-5p mature miRNA
• Sequence: 12 - UAAUUCUUGCUCCCCAGGUGAGAGU - 36
• Evidence: not_experimental

Mature bta-miR-502b-3p

• Accession: MIMAT0009339
• Description: Bos taurus bta-miR-502b-3p mature miRNA
• Sequence: 52 - UCCACCUGGGCAAGGAUUCUGA - 73
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125