Stem-loop bta-mir-190b

Accession

MI0009763

Description

Bos taurus bta-mir-190b precursor miRNA

Literature search

2 open access papers mention bta-mir-190b
(9 sentences)

Sequence

106 reads, 5 reads per million, 45 experiments

ugcuucugugUGAUAUGUUUGAUAUUGGGUUguuuaauuaggaaccaacuaaaugucaaacauauucuuacagcaguag
((((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).)))).

Structure

-    u     -U               G     -   aa 
 ugcu cugug  GAUAUGUUUGAUAUU GGUUg uuu  u
 |||| |||||  ||||||||||||||| ||||| |||   
 auga gacau  uuauacaaacuguaa ucaac aag  u
g    c     uc               a     c   ga 

Annotation confidence Not enough data

Genome context

chr3: 16531292-16531370 [+]

Mature bta-miR-190b

• Accession: MIMAT0009252
• Description: Bos taurus bta-miR-190b mature miRNA
• Sequence: 11 - UGAUAUGUUUGAUAUUGGGUU - 31
• Evidence: experimental ; Array [3], qRT-PCR [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125