Stem-loop bta-mir-412

Accession

MI0009827

Description

Bos taurus bta-mir-412 precursor miRNA

Literature search

2 open access papers mention bta-mir-412
(2 sentences)

Sequence

877 reads, 19 reads per million, 63 experiments

cugggguacaggacggauggucgaccaguuggaaaguaauuguuucuaauguACUUCACCUGGUCCACUAGCUGUccguacccacugcag
...((((((.((((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).)))))))))))).......

Structure

----cug      a      a    c      u   aa    -    u 
       ggguac ggacgg uggu gaccag ugg  agua auug u
       |||||| |||||| |||| |||||| |||  |||| ||||  
       cccaug ccUGUC AUCA CUGGUC ACU  UCAu uaau u
gacguca      -      G    C      C   --    g    c 

Annotation confidence Not enough data

Genome context

chr21: 67881761-67881850 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from bta-mir-412

Mature bta-miR-412

• Accession: MIMAT0009313
• Description: Bos taurus bta-miR-412 mature miRNA
• Sequence: 53 - ACUUCACCUGGUCCACUAGCUGU - 75
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125