Stem-loop bta-mir-136

Accession

MI0009739

Description

Bos taurus bta-mir-136 precursor miRNA

Literature search

4 open access papers mention bta-mir-136
(6 sentences)

Sequence

36547 reads, 406 reads per million, 66 experiments

uuggaugagcccucggaggACUCCAUUUGUUUUGAUGAUGGAuucuuacgcuccaucaucgucucaaaugagucuucagaggguuccaucau
...(((((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))).))))..

Structure

uug    -       g        C     UUU          uuc 
   gaug agcccuc gaggACUC AUUUG   UGAUGAUGGA   u
   |||| ||||||| |||||||| |||||   ||||||||||   u
   cuac uugggag cuucugag uaaac   gcuacuaccu   a
-ua    c       a        -     ucu          cgc 

Annotation confidence High

Genome context

chr21: 67710178-67710269 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-136

Mature bta-miR-136

• Accession: MIMAT0009230
• Description: Bos taurus bta-miR-136 mature miRNA
• Sequence: 20 - ACUCCAUUUGUUUUGAUGAUGGA - 42
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125