Stem-loop bta-mir-599

Accession

MI0009876

Description

Bos taurus bta-mir-599 precursor miRNA

Literature search

2 open access papers mention bta-mir-599
(53 sentences)

Sequence

291 reads, 1.0 reads per million, 84 experiments

aaagacgugcuguccacaguguguuugauaagcugacaugggacagggacucuuuucacuGUUGUGUCAGUUUAUCAAACccauacguggaugac
...........((((((.(((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))...

Structure

aaagacgugcu      a    --                 gg     -   c 
           guccac gugu  guuugauaagcugacau  gacag gga u
           |||||| ||||  |||||||||||||||||  ||||| ||| c
           uaggug caua  CAAACUAUUUGACUGUG  UUGuc cuu u
--------cag      -    cc                 --     a   u 

Annotation confidence Not enough data

Genome context

14: 64795492-64795586 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-599

Mature bta-miR-599-3p

• Accession: MIMAT0009354
• Description: Bos taurus bta-miR-599-3p mature miRNA
• Sequence: 61 - GUUGUGUCAGUUUAUCAAAC - 80
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125