miRBase entry: bta-mir-431

Stem-loop bta-mir-431

Accession

MI0009830

Description

Bos taurus bta-mir-431 precursor miRNA

Literature search

4 open access papers mention bta-mir-431
(4 sentences)

Sequence

296 reads, 3 reads per million, 59 experiments

uccugcgcguccugcgaggUGUCUUGCAGGCCGUCAUGCAGGccacacugacggaaacguugcaggucgucuugcagggcuucucgcaagacgacauauucaucacccucgacg
.......((((.(((((((.((((((((((.((.(.((((..........(((....))))))).).)).)))))))))).))))))).)))).....................

Structure

--------------uccugcg    c       U          C  U A    GGccacacug   g 
                     cguc ugcgagg GUCUUGCAGG CG C UGCA          acg a
                     |||| ||||||| |||||||||| || | ||||          |||  
                     gcag acgcucu cgggacguuc gc g acgu          ugc a
gcagcucccacuacuuauaca    a       u          u  u g    ----------   a

Annotation confidence Not enough data

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Genome context

chr21: 67706530-67706643 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-431

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bta-miR-431

Accession	MIMAT0009316
Description	Bos taurus bta-miR-431 mature miRNA
Sequence	20 - UGUCUUGCAGGCCGUCAUGCAGG - 42
Evidence	not_experimental

References

PubMed ID: 18945293
Annotation of 390 bovine miRNA genes by sequence similarity with other species
"Strozzi F, Mazza R, Malinverni R, Williams JL"
"Anim Genet (2009) 40:125