Stem-loop bta-mir-876

Accession

MI0009902

Description

Bos taurus bta-mir-876 precursor miRNA

Literature search

8 open access papers mention bta-mir-876
(19 sentences)

Sequence

591 reads, 4.0 reads per million, 81 experiments

ugaagugcugUGGAUUUCUUUGUGAAUCACCAUaucuaagcuaauguggUGGUGGUUUACAAAGUAAUUCAUagugcuuca
((((((((((((((((.((((((((((((((((..(.........)..)))))))))))))))).))))))))))))))))

Structure

                U                au uaa 
ugaagugcugUGGAUU CUUUGUGAAUCACCAU  c   g
|||||||||||||||| ||||||||||||||||  |   c
acuucgugaUACUUAA GAAACAUUUGGUGGUg  g   u
                U                gu uaa 

Annotation confidence Medium

Genome context

8: 15239262-15239342 [+]

Mature bta-miR-876-5p

• Accession: MIMAT0009380
• Description: Bos taurus bta-miR-876-5p mature miRNA
• Sequence: 11 - UGGAUUUCUUUGUGAAUCACCAU - 33
• Evidence: not_experimental

Mature bta-miR-876-3p

• Accession: MIMAT0050890
• Description: Bos taurus bta-miR-876-3p mature miRNA
• Sequence: 50 - UGGUGGUUUACAAAGUAAUUCAU - 72
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125