Stem-loop bta-mir-33a

Accession

MI0009807

Description

Bos taurus bta-mir-33a precursor miRNA

Literature search

45 open access papers mention bta-mir-33a
(200 sentences)

Sequence

36925 reads, 20.0 reads per million, 311 experiments

cugcgGUGCAUUGUAGUUGCAUUGCAuguucuggcgguacccgugCAAUGUUUCCACAGUGCAUCAcag
(((.((((((((((.(..((((((((((....((.....))))))))))))..).)))))))))).)))

Structure

   c          A UU          uucu  c 
cug gGUGCAUUGU G  GCAUUGCAug    gg g
||| |||||||||| |  ||||||||||    || g
gac CUACGUGACA C  UGUAACgugc    cc u
   A          C UU          ----  a 

Annotation confidence High

Genome context

5: 112884574-112884642 [+]

Mature bta-miR-33a-5p

• Accession: MIMAT0009294
• Description: Bos taurus bta-miR-33a-5p mature miRNA
• Sequence: 6 - GUGCAUUGUAGUUGCAUUGCA - 26
• Evidence: not_experimental

Mature bta-miR-33a-3p

• Accession: MIMAT0061004
• Description: Bos taurus bta-miR-33a-3p mature miRNA
• Sequence: 46 - CAAUGUUUCCACAGUGCAUCA - 66
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125