Stem-loop bta-mir-105a

Accession

MI0009723

Description

Bos taurus bta-mir-105a precursor miRNA

Literature search

1 open access papers mention bta-mir-105a
(1 sentences)

Sequence

84 reads, 10 reads per million, 42 experiments

ugugcaucguagUCAAAUGCUCAGACUCCUGUGGUggcugcucaugcaccacggauguuugagcaugugcuacggugucua
...(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).)))))))))))...

Structure

ugu         U  A          UC        gcug 
   gcaucguag CA AUGCUCAGAC  CUGUGGUg    c
   ||||||||| || ||||||||||  ||||||||     
   uguggcauc gu uacgaguuug  ggcaccac    u
auc         -  g          ua        guac 

Annotation confidence Not enough data

Genome context

chrX: 35236061-35236141 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-105a

Mature bta-miR-105a

• Accession: MIMAT0009217
• Description: Bos taurus bta-miR-105a mature miRNA
• Sequence: 13 - UCAAAUGCUCAGACUCCUGUGGU - 35
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125