Stem-loop bta-mir-875

Accession

MI0009901

Description

Bos taurus bta-mir-875 precursor miRNA

Literature search

2 open access papers mention bta-mir-875
(2 sentences)

Sequence

125 reads, 0.0 reads per million, 51 experiments

uuagugggacUAUACCUCAGUUUUAUCAGGUGuuauuuaaaaucaccuggaaauacugagguuguguuucacugaac
((((((((((...((((((((.((.(((((((...........))))))).)).))))))))...))))))))))..

Structure

--          UAU        U  A       uuau 
  uuagugggac   ACCUCAGU UU UCAGGUG    u
  ||||||||||   |||||||| || |||||||    u
  agucacuuug   uggaguca aa gguccac    a
ca          ugu        u  a       uaaa 

Annotation confidence Not enough data

Genome context

14: 64795360-64795436 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-875

Mature bta-miR-875-5p

• Accession: MIMAT0009379
• Description: Bos taurus bta-miR-875-5p mature miRNA
• Sequence: 11 - UAUACCUCAGUUUUAUCAGGUG - 32
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125